FLCore - Core Package of FLR, Fisheries Modelling in R

Core classes and methods for FLR, a framework for fisheries modelling and management strategy simulation in R. Developed by a team of fisheries scientists in various countries. More information can be found at <http://flr-project.org/>.

Last updated 21 hours ago

fisheriesflrfisheries-modelling

8.78 score 16 stars 23 dependents 956 scripts 70 downloads

ggplotFL - Using ggplot2 in FLR

Using ggplot2 for FLR. Provides (1) overloaded ggplot methods for various FLR classes, (2) ggplot-based versions of standard plots in the FLCore package, and (3) new geoms for using FLR objects.

Last updated 2 months ago

visualizationggplot2fisheriesflr

7.60 score 4 stars 12 dependents 460 scripts

mse - Tools for Running Management Strategy Evaluations using FLR

A set of functions and methods to enable the development and running of Management Strategy Evaluation (MSE) analyses, using the FLR packages and classes and the a4a methods and algorithms.

Last updated 7 days ago

simulationmsefisheriesflra4a

7.14 score 4 stars 3 dependents 146 scripts

FLasher - Projection and Forecasting of Fish Populations, Stocks and Fleets

Projection of future population and fishery dynamics is carried out for a given set of management targets. A system of equations is solved, using Automatic Differentation (AD), for the levels of effort by fishery (fleet) that will result in the required abundances, catches or fishing mortalities.

Last updated 13 days ago

forecastfisheriesflrcpp

6.86 score 2 stars 6 dependents 254 scripts

FLBRP - Reference Points for Fisheries Management

Calculates a range of biological reference points based upon yield per recruit and stock recruit based equilibrium calculations. These include F based reference points like F0.1, FMSY and biomass based reference points like BMSY.

Last updated 3 months ago

reference pointsfisheriesflrcpp

6.58 score 2 stars 4 dependents 350 scripts

jjmR - Graphics and diagnostics tools for SPRFMO's Joint Jack Mackerel model

Graphics and diagnostics tools for SPRFMO's Joint Jack Mackerel model.

Last updated 6 months ago

3.81 score 2 stars 1 dependents 12 scripts

FLjjm - Running the JJM Stock Assessment Model Inside the MSE FLR System

Runs the JJM stock assessment model for Chilean Jack Mackerel inside the MSE system of FLR's mse package.

Last updated 13 days ago

3.74 score 3 scripts

FLSRTMB - FLSR in TMB

Estimates FLR spawner recruitment relationships in TMB

Last updated 18 days ago

stock-recruitfisheriesflrtmbadcpp

3.67 score 1 dependents 26 scripts

FLFishery - Classes and Methods for Simpler Fleet/Fishery Modelling

A set of classes and methods for modelling of fleet dynamics. Fisheries are groups of vessels sharing an effort time series, with static or changing spatio-temporal patterns in selectivity.

Last updated 3 months ago

fisheriesflr

3.02 score 7 dependents 8 scripts

mseviz - Plots and Visualization Tools for Management Strategy Evaluation Results

A set of plots and visualization tools to explore and present the results of Management Strategy Evaluation (MSE) analyses.

Last updated 9 months ago

2.70 score 10 scripts