Package: FLSRTMB 1.1.4.9015
Henning Winker
FLSRTMB: FLSR in TMB
Estimates FLR spawner recruitment relationships in TMB
Authors:
FLSRTMB_1.1.4.9015.tar.gz
FLSRTMB_1.1.4.9015.zip(r-4.5)FLSRTMB_1.1.4.9015.zip(r-4.4)FLSRTMB_1.1.4.9015.zip(r-4.3)
FLSRTMB_1.1.4.9015.tgz(r-4.4-x86_64)FLSRTMB_1.1.4.9015.tgz(r-4.4-arm64)FLSRTMB_1.1.4.9015.tgz(r-4.3-x86_64)FLSRTMB_1.1.4.9015.tgz(r-4.3-arm64)
FLSRTMB_1.1.4.9015.tar.gz(r-4.5-noble)FLSRTMB_1.1.4.9015.tar.gz(r-4.4-noble)
FLSRTMB_1.1.4.9015.tgz(r-4.4-emscripten)FLSRTMB_1.1.4.9015.tgz(r-4.3-emscripten)
FLSRTMB.pdf |FLSRTMB.html✨
FLSRTMB/json (API)
NEWS
| # Install 'FLSRTMB' in R: |
| install.packages('FLSRTMB', repos = c('https://sprfmo.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/flr/flsrtmb/issues
stock-recruitfisheriesflrtmbadcpp
Last updated 6 hours agofrom:4099048f5e. Checks:OK: 1 ERROR: 8. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 26 2024 |
| R-4.5-win-x86_64 | ERROR | Nov 26 2024 |
| R-4.5-linux-x86_64 | ERROR | Nov 26 2024 |
| R-4.4-win-x86_64 | ERROR | Nov 26 2024 |
| R-4.4-mac-x86_64 | ERROR | Nov 26 2024 |
| R-4.4-mac-aarch64 | ERROR | Nov 26 2024 |
| R-4.3-win-x86_64 | ERROR | Nov 26 2024 |
| R-4.3-mac-x86_64 | ERROR | Nov 26 2024 |
| R-4.3-mac-aarch64 | ERROR | Nov 26 2024 |
Exports:blimpriorbootstrapSRdpriorfrom_logitdfrom_logitsgmhsblimplot_bootstrapSRplotjitterplotsrsplotsrtsproductivityspr0ysprFyspriorsrrjittersrrTMBto_logitdto_logits
Dependencies:clicodetoolscolorspacecowplotdata.tabledigestdoFuturefansifarverFLCoreforeachfuturefuture.applyggplot2ggplotFLggrepelglobalsgluegridExtragtableisobanditeratorslabelinglatticelifecyclelistenvmagrittrMASSMatrixmgcvmunsellnlmeparallellypillarpkgconfigprogressrR6RColorBrewerRcppRcppEigenrlangscalestibbleTMButf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| blimprior plot Plots the bounds of the hockey-stick break-point | blimprior |
| Bootstrap fits of mutliple stock-recruits relationships | bootstrapSR |
| dprior plot Plots the logit prior distribution for depensation | dprior |
| from_logitd() | from_logitd |
| from_logits() | from_logits |
| gm() | gm |
| hsblim() | hsblim |
| plots Jitter results | plotjitter |
| plotsrs based on plot(FLSRs) Plots FLSRs, i.e. multiple S-R relationships | plotsrs |
| Plots time series of observed and predicted recruitment | plotsrts |
| productivity() | productivity |
| spr0y() | spr0y |
| sprFy() | sprFy |
| sprior plot Plots the logit prior distribution for steepness | sprior |
| Jitter of S-R fits | srrjitter |
| Fits Stock Recruitment Relationships (SRR) in TMB | srrTMB srrTMB,FLSR-method srrTMB,FLSRs-method |
| to_logitd() | to_logitd |
| to_logits() | to_logits |